Rheinheimera pacifica strain DSM 17616

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Chromatiales

Family

Chromatiaceae

Genus

Rheinheimera

Description

Rheinheimera pacifica strain DSM 17616 is a Gram-negative, aerobic bacterium characterized by its rod-shaped morphology. This strain is notable for possessing a single replicon, which is significant for its genetic stability and replication processes. The genome of Rheinheimera pacifica strain DSM 17616 is accessible under the accession number FNXF00000000.1, allowing for further genomic studies and insights into its metabolic capabilities. As an aerobic organism, Rheinheimera pacifica strain DSM 17616 requires oxygen for its growth and metabolic processes, positioning it within environments where oxygen is readily available. This trait suggests that it may thrive in oxygen-rich aquatic ecosystems, aligning with its classification within the Rheinheimera genus, which includes bacteria commonly found in marine environments. The ecological role of Rheinheimera pacifica strain DSM 17616 could be linked to its potential involvement in nutrient cycling within its habitat. Given its aerobic nature, it may play a part in the degradation of organic matter, contributing to the overall health and balance of marine ecosystems. Understanding the traits and ecological functions of this strain can provide insights into the dynamics of microbial communities, particularly in marine environments where such bacteria may influence nutrient availability and ecosystem stability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderChromatiales
FamilyChromatiaceae
GenusRheinheimera
SpeciesRheinheimera pacifica
Strainstrain DSM 17616

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Rheinheimera pacifica strain DSM 17616
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rheinheimera pacifica strain DSM 17616 genome assembly, contig:

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphoribosylamine--glycine ligaseSAMN05660691_00360Not AvailableNegative405308 - 40659444297.8
predicted methyltransferaseSAMN05660691_00361Not AvailableNegative406652 - 40748830387.0
trna (cytidine32/uridine32-2'-o)-methyltransferaseSAMN05660691_00362Not AvailablePositive407659 - 40839927142.6
serine o-acetyltransferaseSAMN05660691_00363Not AvailablePositive408403 - 40921229220.0
transcriptional regulator, badm/rrf2 familySAMN05660691_00364Not AvailablePositive409316 - 40979817361.7
cysteine desulfuraseSAMN05660691_00365Not AvailablePositive409816 - 41103044826.1
nitrogen fixation protein nifuSAMN05660691_00366Not AvailablePositive411061 - 41144413526.1
iron-sulfur cluster assembly proteinSAMN05660691_00367Not AvailablePositive411450 - 41177311589.7
molecular chaperone hscbSAMN05660691_00368Not AvailablePositive411815 - 41233920336.2
molecular chaperone hscaSAMN05660691_00369Not AvailablePositive412348 - 41420165704.5

Displaying genes 411 – 420 of 4169 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.