Rheinheimera pacifica strain DSM 17616

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Chromatiales

Family

Chromatiaceae

Genus

Rheinheimera

Description

Rheinheimera pacifica strain DSM 17616 is a Gram-negative, aerobic bacterium characterized by its rod-shaped morphology. This strain is notable for possessing a single replicon, which is significant for its genetic stability and replication processes. The genome of Rheinheimera pacifica strain DSM 17616 is accessible under the accession number FNXF00000000.1, allowing for further genomic studies and insights into its metabolic capabilities. As an aerobic organism, Rheinheimera pacifica strain DSM 17616 requires oxygen for its growth and metabolic processes, positioning it within environments where oxygen is readily available. This trait suggests that it may thrive in oxygen-rich aquatic ecosystems, aligning with its classification within the Rheinheimera genus, which includes bacteria commonly found in marine environments. The ecological role of Rheinheimera pacifica strain DSM 17616 could be linked to its potential involvement in nutrient cycling within its habitat. Given its aerobic nature, it may play a part in the degradation of organic matter, contributing to the overall health and balance of marine ecosystems. Understanding the traits and ecological functions of this strain can provide insights into the dynamics of microbial communities, particularly in marine environments where such bacteria may influence nutrient availability and ecosystem stability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderChromatiales
FamilyChromatiaceae
GenusRheinheimera
SpeciesRheinheimera pacifica
Strainstrain DSM 17616

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Rheinheimera pacifica strain DSM 17616
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rheinheimera pacifica strain DSM 17616 genome assembly, contig:

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
large subunit ribosomal protein l27SAMN05660691_03495Not AvailableNegative3782041 - 37822989209.08
large subunit ribosomal protein l21SAMN05660691_03496Not AvailableNegative3782314 - 378262211389.9
octaprenyl-diphosphate synthaseSAMN05660691_03497Not AvailablePositive3782833 - 378380435185.2
malate dehydrogenase (nad)SAMN05660691_03498Not AvailableNegative3783860 - 378479832375.3
transcriptional regulator, argr familySAMN05660691_03499Not AvailablePositive3784986 - 378545917305.2
putative iron-dependent peroxidaseSAMN05660691_03500Not AvailableNegative3785460 - 378638034270.2
methylglyoxal synthaseSAMN05660691_03501Not AvailableNegative3787031 - 378746216019.2
ketol-acid reductoisomeraseSAMN05660691_03502Not AvailableNegative3787646 - 378912754037.9
lysr family transcriptional regulator, positive regulator for ilvcSAMN05660691_03503Not AvailablePositive3789286 - 379017032919.2
stringent starvation protein bSAMN05660691_03504Not AvailableNegative3790191 - 379061015572.4

Displaying genes 3481 – 3490 of 4169 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.