Rheinheimera pacifica strain DSM 17616

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Chromatiales

Family

Chromatiaceae

Genus

Rheinheimera

Description

Rheinheimera pacifica strain DSM 17616 is a Gram-negative, aerobic bacterium characterized by its rod-shaped morphology. This strain is notable for possessing a single replicon, which is significant for its genetic stability and replication processes. The genome of Rheinheimera pacifica strain DSM 17616 is accessible under the accession number FNXF00000000.1, allowing for further genomic studies and insights into its metabolic capabilities. As an aerobic organism, Rheinheimera pacifica strain DSM 17616 requires oxygen for its growth and metabolic processes, positioning it within environments where oxygen is readily available. This trait suggests that it may thrive in oxygen-rich aquatic ecosystems, aligning with its classification within the Rheinheimera genus, which includes bacteria commonly found in marine environments. The ecological role of Rheinheimera pacifica strain DSM 17616 could be linked to its potential involvement in nutrient cycling within its habitat. Given its aerobic nature, it may play a part in the degradation of organic matter, contributing to the overall health and balance of marine ecosystems. Understanding the traits and ecological functions of this strain can provide insights into the dynamics of microbial communities, particularly in marine environments where such bacteria may influence nutrient availability and ecosystem stability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderChromatiales
FamilyChromatiaceae
GenusRheinheimera
SpeciesRheinheimera pacifica
Strainstrain DSM 17616

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Rheinheimera pacifica strain DSM 17616
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rheinheimera pacifica strain DSM 17616 genome assembly, contig:

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trap-type c4-dicarboxylate transport system, small permease componentSAMN05660691_02859Not AvailableNegative3072879 - 307337918036.9
tripartite atp-independent transporter solute receptor, dctp familySAMN05660691_02860Not AvailableNegative3073372 - 307437937116.3
4-deoxy-l-threo-5-hexosulose-uronate ketol-isomeraseSAMN05660691_02861Not AvailableNegative3074470 - 307531231598.6
2-deoxy-d-gluconate 3-dehydrogenaseSAMN05660691_02862Not AvailableNegative3075340 - 307609826055.1
tonb-dependent receptorSAMN05660691_02863Not AvailablePositive3076472 - 3079276102835.0
rhamnogalacturonyl hydrolase yesrSAMN05660691_02864Not AvailablePositive3079402 - 308187091275.4
pectinesteraseSAMN05660691_02865Not AvailablePositive3082060 - 308307338574.6
lysophospholipase l1SAMN05660691_02866Not AvailablePositive3083077 - 308382928205.5
molecular chaperone grpeSAMN05660691_02867Not AvailableNegative3083991 - 308455420627.4
heat-inducible transcription repressor hrcaSAMN05660691_02868Not AvailableNegative3084585 - 308561638190.0

Displaying genes 2851 – 2860 of 4169 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.