Rheinheimera pacifica strain DSM 17616

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Chromatiales

Family

Chromatiaceae

Genus

Rheinheimera

Description

Rheinheimera pacifica strain DSM 17616 is a Gram-negative, aerobic bacterium characterized by its rod-shaped morphology. This strain is notable for possessing a single replicon, which is significant for its genetic stability and replication processes. The genome of Rheinheimera pacifica strain DSM 17616 is accessible under the accession number FNXF00000000.1, allowing for further genomic studies and insights into its metabolic capabilities. As an aerobic organism, Rheinheimera pacifica strain DSM 17616 requires oxygen for its growth and metabolic processes, positioning it within environments where oxygen is readily available. This trait suggests that it may thrive in oxygen-rich aquatic ecosystems, aligning with its classification within the Rheinheimera genus, which includes bacteria commonly found in marine environments. The ecological role of Rheinheimera pacifica strain DSM 17616 could be linked to its potential involvement in nutrient cycling within its habitat. Given its aerobic nature, it may play a part in the degradation of organic matter, contributing to the overall health and balance of marine ecosystems. Understanding the traits and ecological functions of this strain can provide insights into the dynamics of microbial communities, particularly in marine environments where such bacteria may influence nutrient availability and ecosystem stability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderChromatiales
FamilyChromatiaceae
GenusRheinheimera
SpeciesRheinheimera pacifica
Strainstrain DSM 17616

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Rheinheimera pacifica strain DSM 17616
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rheinheimera pacifica strain DSM 17616 genome assembly, contig:

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glyceraldehyde-3-phosphate dehydrogenase (nadp+)SAMN05660691_02849Not AvailableNegative3059416 - 306102959219.6
2-dehydro-3-deoxygluconokinaseSAMN05660691_02850Not AvailableNegative3061577 - 306253335053.9
2-dehydro-3-deoxyphosphogluconate aldolase / (4s)-4-hydroxy-2-oxoglutarate aldolaseSAMN05660691_02851Not AvailableNegative3062545 - 306320122478.6
fructuronate reductaseSAMN05660691_02852Not AvailableNegative3063201 - 306467053070.7
glucuronate isomeraseSAMN05660691_02853Not AvailableNegative3064824 - 306624853857.0
altronate hydrolaseSAMN05660691_02854Not AvailableNegative3066305 - 306786155260.8
glycosyl hydrolases family 28SAMN05660691_02855Not AvailableNegative3068069 - 306950852274.3
transcriptional regulator, laci familySAMN05660691_02856Not AvailableNegative3069695 - 307072937487.0
transcriptional regulator, iclr familySAMN05660691_02857Not AvailableNegative3070740 - 307152528413.6
trap transporter, dctm subunitSAMN05660691_02858Not AvailableNegative3071584 - 307287945115.1

Displaying genes 2841 – 2850 of 4169 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.