Rheinheimera pacifica strain DSM 17616

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Chromatiales

Family

Chromatiaceae

Genus

Rheinheimera

Description

Rheinheimera pacifica strain DSM 17616 is a Gram-negative, aerobic bacterium characterized by its rod-shaped morphology. This strain is notable for possessing a single replicon, which is significant for its genetic stability and replication processes. The genome of Rheinheimera pacifica strain DSM 17616 is accessible under the accession number FNXF00000000.1, allowing for further genomic studies and insights into its metabolic capabilities. As an aerobic organism, Rheinheimera pacifica strain DSM 17616 requires oxygen for its growth and metabolic processes, positioning it within environments where oxygen is readily available. This trait suggests that it may thrive in oxygen-rich aquatic ecosystems, aligning with its classification within the Rheinheimera genus, which includes bacteria commonly found in marine environments. The ecological role of Rheinheimera pacifica strain DSM 17616 could be linked to its potential involvement in nutrient cycling within its habitat. Given its aerobic nature, it may play a part in the degradation of organic matter, contributing to the overall health and balance of marine ecosystems. Understanding the traits and ecological functions of this strain can provide insights into the dynamics of microbial communities, particularly in marine environments where such bacteria may influence nutrient availability and ecosystem stability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderChromatiales
FamilyChromatiaceae
GenusRheinheimera
SpeciesRheinheimera pacifica
Strainstrain DSM 17616

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Rheinheimera pacifica strain DSM 17616
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rheinheimera pacifica strain DSM 17616 genome assembly, contig:

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
penicillin-binding protein 1bSAMN05660691_02231Not AvailableNegative2415375 - 241765185517.0
atp-dependent helicase hrpbSAMN05660691_02232Not AvailableNegative2417648 - 242009289913.6
pepb aminopeptidaseSAMN05660691_02233Not AvailableNegative2420191 - 242148045402.9
transcriptional regulator, trar/dksa familySAMN05660691_02234Not AvailablePositive2421746 - 242219517095.4
glutamyl-q trna(asp) synthetaseSAMN05660691_02235Not AvailablePositive2422197 - 242310233806.8
poly(a) polymeraseSAMN05660691_02236Not AvailablePositive2423213 - 242466154623.3
2-amino-4-hydroxy-6- hydroxymethyldihydropteridinediphosphokinaseSAMN05660691_02237Not AvailablePositive2424658 - 242515818266.0
3-methyl-2-oxobutanoate hydroxymethyltransferaseSAMN05660691_02238Not AvailablePositive2425212 - 242600327737.8
pantoate--beta-alanine ligaseSAMN05660691_02239Not AvailablePositive2426009 - 242685130624.8
di-and tricarboxylate transportersSAMN05660691_02240Not AvailableNegative2426878 - 242923583901.5

Displaying genes 2231 – 2240 of 4169 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.