Tardiphaga sp. OK245

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Tardiphaga

Description

Tardiphaga sp. OK245 is characterized by possessing a single replicon, indicating a streamlined genetic structure. The organism is cataloged under the accession number FNWZ00000000.1, which serves as a reference for genomic data pertaining to this species. The presence of only one replicon suggests that Tardiphaga sp. OK245 may exhibit a relatively simple genomic organization compared to organisms with multiple replicons. This trait can influence various biological processes, including replication speed and genetic stability. Understanding the genetic makeup of Tardiphaga sp. OK245 is essential for further ecological insights. The streamlined genomic structure may provide advantages in specific environments, such as the ability to quickly adapt to changes or utilize resources efficiently. These characteristics could play a significant role in the organism's ecological niche and interactions within its habitat. Overall, the unique genomic configuration of Tardiphaga sp. OK245 may contribute to its resilience and adaptability in varying conditions, highlighting the importance of genetic traits in microbial ecology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusTardiphaga
SpeciesTardiphaga sp. OK245
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Tardiphaga sp. OK245 genome assembly, contig: Ga0066776_112, whole

Gene Summary

Adenine Count

1238932 bp

Thymine Count

1208594 bp

Guanine Count

1928978 bp

Cytosine Count

1980322 bp

Genome Length

6356861 bp

Protein-coding Genes

5881 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSAMN05216367_0262Not AvailableNegative285826 - 28841492281.8
4-hydroxy-3-methylbut-2-enyl diphosphate reductaseSAMN05216367_0263Not AvailablePositive288808 - 28975234004.9
hopanoid biosynthesis associated radical sam protein hpnhSAMN05216367_0264Not AvailablePositive289795 - 29096443263.4
hopanoid-associated phosphorylaseSAMN05216367_0265Not AvailableNegative291069 - 29180325119.4
squalene-hopene/tetraprenyl-beta-curcumene cyclaseSAMN05216367_0266Not AvailableNegative291800 - 29377373248.8
squalene-associated fad-dependent desaturaseSAMN05216367_0267Not AvailableNegative293816 - 29506644618.5
farnesyl-diphosphate farnesyltransferaseSAMN05216367_0268Not AvailableNegative295066 - 29592031697.4
squalene synthase hpncSAMN05216367_0269Not AvailableNegative295917 - 29679832451.0
cysteine rich repeat-containing proteinSAMN05216367_0270Not AvailableNegative297029 - 2972718629.48
hypothetical proteinSAMN05216367_0271Not AvailablePositive297711 - 29821116932.8

Displaying genes 271 – 280 of 5940 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.