Tardiphaga sp. OK245

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Tardiphaga

Description

Tardiphaga sp. OK245 is characterized by possessing a single replicon, indicating a streamlined genetic structure. The organism is cataloged under the accession number FNWZ00000000.1, which serves as a reference for genomic data pertaining to this species. The presence of only one replicon suggests that Tardiphaga sp. OK245 may exhibit a relatively simple genomic organization compared to organisms with multiple replicons. This trait can influence various biological processes, including replication speed and genetic stability. Understanding the genetic makeup of Tardiphaga sp. OK245 is essential for further ecological insights. The streamlined genomic structure may provide advantages in specific environments, such as the ability to quickly adapt to changes or utilize resources efficiently. These characteristics could play a significant role in the organism's ecological niche and interactions within its habitat. Overall, the unique genomic configuration of Tardiphaga sp. OK245 may contribute to its resilience and adaptability in varying conditions, highlighting the importance of genetic traits in microbial ecology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusTardiphaga
SpeciesTardiphaga sp. OK245
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Tardiphaga sp. OK245 genome assembly, contig: Ga0066776_112, whole

Gene Summary

Adenine Count

1238932 bp

Thymine Count

1208594 bp

Guanine Count

1928978 bp

Cytosine Count

1980322 bp

Genome Length

6356861 bp

Protein-coding Genes

5881 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glycine dehydrogenaseSAMN05216367_0252Not AvailablePositive274238 - 277102102964.0
ferritin-like metal-binding protein ycieSAMN05216367_0253Not AvailableNegative277304 - 27780118216.7
hippurate hydrolaseSAMN05216367_0254Not AvailableNegative277915 - 27908742058.7
choline dehydrogenaseSAMN05216367_0255Not AvailablePositive279253 - 28087258842.2
3',5'-cyclic amp phosphodiesterase cpdaSAMN05216367_0256Not AvailablePositive280950 - 28190034301.8
cupredoxin-like domain-containing proteinSAMN05216367_0257Not AvailablePositive281913 - 28224212120.7
rna polymerase sigma-70 factor, ecf subfamilySAMN05216367_0258Not AvailablePositive282268 - 28288523186.7
transmembrane transcriptional regulator (anti-sigma factor rsiw)SAMN05216367_0259Not AvailablePositive282882 - 28363427353.7
ornithine--oxo-acid transaminaseSAMN05216367_0260Not AvailableNegative283638 - 28502950779.7
uncharacterized conserved protein, duf2147 familySAMN05216367_0261Not AvailablePositive285129 - 28583623923.6

Displaying genes 261 – 270 of 5940 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.