Algoriphagus boritolerans DSM 17298 = JCM 18970

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Cyclobacteriaceae

Genus

Algoriphagus

Description

Algoriphagus boritolerans DSM 17298 = JCM 18970 is a Gram-negative, non-motile bacterium characterized by its rod shape. This species is classified as mesophilic, with an optimal growth temperature of 29°C. The organism contains a single replicon, and its genomic information is accessible under the accession FNVR00000000.1. The traits of Algoriphagus boritolerans suggest its adaptation to moderate temperature environments, likely influencing its ecological niche. Its non-motile nature may limit its dispersal capabilities, potentially resulting in a more specialized habitat preference. The Gram-negative classification indicates the presence of an outer membrane, which may play a significant role in its interactions with the environment, such as in nutrient uptake or defense against competing microbial species. Understanding the characteristics of Algoriphagus boritolerans contributes to the broader knowledge of microbial diversity in various habitats, particularly those that exhibit moderate temperatures. This bacterium's specific traits may influence its ecological roles, such as in nutrient cycling or interactions within microbial communities. The study of such organisms enhances our understanding of microbial ecology and the complex relationships that sustain ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyCyclobacteriaceae
GenusAlgoriphagus
SpeciesAlgoriphagus boritolerans
StrainDSM 17298 = JCM 18970

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Algoriphagus boritolerans DSM 17298 = JCM 18970 genome assembly,

Gene Summary

Adenine Count

1384007 bp

Thymine Count

1381548 bp

Guanine Count

1039496 bp

Cytosine Count

1023404 bp

Genome Length

4834448 bp

Protein-coding Genes

4271 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
catechol 2,3-dioxygenaseSAMN03080598_00028Not AvailableNegative26433 - 2692118162.7
alpha-glucuronidaseSAMN03080598_00029Not AvailableNegative27140 - 2929981955.1
atp-dependent exodnase (exonuclease v) beta subunit (contains helicase and exonuclease domains)SAMN03080598_00030Not AvailablePositive29475 - 32693123247.0
pd-(d/e)xk nuclease superfamily proteinSAMN03080598_00031Not AvailablePositive32686 - 35547111491.0
uncharacterized conserved protein ycii, contains a putative active-site phosphohistidineSAMN03080598_00032Not AvailableNegative35714 - 3616316598.4
tigr00341 family proteinSAMN03080598_00033Not AvailableNegative36176 - 3756451721.2
response regulator receiver domain-containing proteinSAMN03080598_00034Not AvailablePositive37959 - 3833014116.0
phospholipid/cholesterol/gamma-hch transport system permease proteinSAMN03080598_00035Not AvailablePositive38390 - 3918728955.8
phospholipid/cholesterol/gamma-hch transport system atp-binding proteinSAMN03080598_00036Not AvailablePositive39191 - 3994928385.3
phospholipid/cholesterol/gamma-hch transport system substrate-binding proteinSAMN03080598_00037Not AvailablePositive39946 - 4092935705.8

Displaying genes 41 – 50 of 4321 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.