Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus boritolerans |
| Strain | DSM 17298 = JCM 18970 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1384007 bp
Thymine Count
1381548 bp
Guanine Count
1039496 bp
Cytosine Count
1023404 bp
Genome Length
4834448 bp
Protein-coding Genes
4271 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein beta-barrel domain-containing protein | SAMN03080598_03838 | Not Available | Positive | 4288174 - 4288752 | 20549.3 |
| conserved hypothetical protein, hne_0200 family | SAMN03080598_03839 | Not Available | Negative | 4288802 - 4289911 | 41266.2 |
| parallel beta-helix repeat-containing protein | SAMN03080598_03840 | Not Available | Negative | 4289922 - 4291220 | 47560.1 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN03080598_03841 | Not Available | Negative | 4291298 - 4291843 | 21266.6 |
| outer membrane protein beta-barrel domain-containing protein | SAMN03080598_03842 | Not Available | Positive | 4291958 - 4292509 | 19530.0 |
| holliday junction endonuclease ruvc | SAMN03080598_03843 | Not Available | Negative | 4292542 - 4293117 | 21373.2 |
| glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-n-acetylglucosamine synthase | SAMN03080598_03844 | Not Available | Positive | 4293139 - 4294239 | 41970.0 |
| hypothetical protein | SAMN03080598_03845 | Not Available | Positive | 4294273 - 4294524 | 9681.45 |
| sigma-b regulation protein rsbu (phosphoserine phosphatase) | SAMN03080598_03846 | Not Available | Positive | 4294528 - 4295739 | 46854.4 |
| peptidoglycan/xylan/chitin deacetylase, pgda/cda1 family | SAMN03080598_03847 | Not Available | Positive | 4295743 - 4296369 | 23902.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
