Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus boritolerans |
| Strain | DSM 17298 = JCM 18970 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1384007 bp
Thymine Count
1381548 bp
Guanine Count
1039496 bp
Cytosine Count
1023404 bp
Genome Length
4834448 bp
Protein-coding Genes
4271 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phytoene/squalene synthetase | SAMN03080598_01549 | Not Available | Positive | 1740498 - 1741340 | 32389.2 |
| lycopene cyclase domain-containing protein | SAMN03080598_01550 | Not Available | Positive | 1741340 - 1742059 | 28275.1 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | SAMN03080598_01551 | Not Available | Positive | 1742056 - 1742901 | 32032.0 |
| beta-carotene ketolase (crtw type) | SAMN03080598_01552 | Not Available | Positive | 1742917 - 1743627 | 27835.8 |
| outer membrane receptor proteins, mostly fe transport | SAMN03080598_01553 | Not Available | Positive | 1743709 - 1746111 | 90230.6 |
| hypothetical protein | SAMN03080598_01554 | Not Available | Negative | 1746269 - 1746397 | 4994.2 |
| hypothetical protein | SAMN03080598_01555 | Not Available | Negative | 1746618 - 1747061 | 16217.3 |
| glutamate or tyrosine decarboxylase | SAMN03080598_01556 | Not Available | Negative | 1747126 - 1748595 | 55001.2 |
| hypothetical protein | SAMN03080598_01557 | Not Available | Negative | 1748815 - 1749183 | 13902.7 |
| thiol-disulfide isomerase or thioredoxin | SAMN03080598_01558 | Not Available | Positive | 1749373 - 1751310 | 74494.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
