Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
847936 bp
Thymine Count
865299 bp
Guanine Count
773817 bp
Cytosine Count
759650 bp
Genome Length
3248162 bp
Protein-coding Genes
2714 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator, narl/fixj family, contains rec and hth domains | SAMN05216354_1076 | Not Available | Positive | 1132543 - 1133187 | 24628.5 |
| o-acetylhomoserine (thiol)-lyase | SAMN05216354_1077 | Not Available | Negative | 1133217 - 1134449 | 44965.9 |
| cysteine desulfurase / selenocysteine lyase | SAMN05216354_1078 | Not Available | Negative | 1134451 - 1135983 | 56336.9 |
| cyclic nucleotide-binding domain-containing protein | SAMN05216354_1079 | Not Available | Negative | 1135983 - 1137422 | 53922.4 |
| tusa-related sulfurtransferase | SAMN05216354_1080 | Not Available | Negative | 1137449 - 1137673 | 8349.17 |
| peroxiredoxin family protein | SAMN05216354_1081 | Not Available | Negative | 1137684 - 1138163 | 17486.4 |
| sulfur carrier protein | SAMN05216354_1082 | Not Available | Positive | 1138338 - 1138550 | 7919.31 |
| molybdopterin or thiamine biosynthesis adenylyltransferase | SAMN05216354_1083 | Not Available | Positive | 1138547 - 1139356 | 29290.5 |
| proteasome lid subunit rpn8/rpn11, contains jab1/mpn metalloenzyme (jamm) motif | SAMN05216354_1084 | Not Available | Positive | 1139360 - 1139764 | 15139.8 |
| ammonium transporter | SAMN05216354_1085 | Not Available | Positive | 1139945 - 1141336 | 50450.3 |
Pathways
401 pathways
Health Effects
No health effects information available for this bacterium.
