Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
847936 bp
Thymine Count
865299 bp
Guanine Count
773817 bp
Cytosine Count
759650 bp
Genome Length
3248162 bp
Protein-coding Genes
2714 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, lyttr family | SAMN05216354_0944 | Not Available | Negative | 947153 - 947965 | 30817.8 |
| protein of unknown function | SAMN05216354_0945 | Not Available | Negative | 947968 - 948780 | 32041.7 |
| ig-like domain-containing protein | SAMN05216354_0946 | Not Available | Negative | 948790 - 950775 | 75393.4 |
| gh3 auxin-responsive promoter | SAMN05216354_0947 | Not Available | Negative | 950818 - 952311 | 56920.0 |
| acetyl esterase/lipase | SAMN05216354_0949 | Not Available | Negative | 952792 - 953640 | 31235.0 |
| sialate o-acetylesterase | SAMN05216354_0950 | Not Available | Positive | 953828 - 955261 | 54040.2 |
| adp-ribose pyrophosphatase yjhb, nudix family | SAMN05216354_0951 | Not Available | Positive | 955268 - 955801 | 19860.7 |
| dna topoisomerase-1 | SAMN05216354_0952 | Not Available | Positive | 955891 - 958203 | 88097.6 |
| shikimate kinase | SAMN05216354_0953 | Not Available | Positive | 958205 - 958732 | 20236.7 |
| arginine decarboxylase | SAMN05216354_0954 | Not Available | Positive | 958729 - 960621 | 71866.6 |
Pathways
401 pathways
Health Effects
No health effects information available for this bacterium.
