Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
847936 bp
Thymine Count
865299 bp
Guanine Count
773817 bp
Cytosine Count
759650 bp
Genome Length
3248162 bp
Protein-coding Genes
2714 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein-l-isoaspartate(d-aspartate) o-methyltransferase (pcmt) | SAMN05216354_0854 | Not Available | Negative | 835528 - 836691 | 43459.3 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05216354_0855 | Not Available | Positive | 836801 - 837280 | 18830.7 |
| hypothetical protein | SAMN05216354_0856 | Not Available | Positive | 837294 - 837875 | 22465.6 |
| eama-like transporter family protein | SAMN05216354_0857 | Not Available | Negative | 837885 - 838817 | 33051.8 |
| n-acetylmuramic acid 6-phosphate etherase | SAMN05216354_0858 | Not Available | Negative | 838841 - 839650 | 29373.8 |
| eama domain-containing membrane protein rard | SAMN05216354_0859 | Not Available | Negative | 839694 - 840566 | 32561.2 |
| protein of unknown function | SAMN05216354_0860 | Not Available | Negative | 840563 - 840829 | 10014.8 |
| peroxiredoxin q/bcp | SAMN05216354_0861 | Not Available | Negative | 840872 - 841327 | 16975.3 |
| tfox n-terminal domain-containing protein | SAMN05216354_0862 | Not Available | Negative | 841324 - 841662 | 12881.6 |
| superoxide dismutase, fe-mn family | SAMN05216354_0863 | Not Available | Negative | 841652 - 842236 | 21676.8 |
Pathways
401 pathways
Health Effects
No health effects information available for this bacterium.
