Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
847936 bp
Thymine Count
865299 bp
Guanine Count
773817 bp
Cytosine Count
759650 bp
Genome Length
3248162 bp
Protein-coding Genes
2714 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal transduction histidine kinase | SAMN05216354_0156 | Not Available | Negative | 42061 - 42981 | 34008.7 |
| stage ii sporulation protein aa (anti-sigma f factor antagonist) | SAMN05216354_0157 | Not Available | Negative | 42988 - 43299 | 11608.4 |
| serine/threonine-protein kinase rsbw | SAMN05216354_0158 | Not Available | Negative | 43320 - 43727 | 15626.9 |
| serine phosphatase rsbu, regulator of sigma subunit | SAMN05216354_0159 | Not Available | Negative | 43755 - 45827 | 79325.0 |
| phospholipid/cholesterol/gamma-hch transport system atp-binding protein | SAMN05216354_0160 | Not Available | Negative | 46069 - 46854 | 29557.8 |
| phospholipid/cholesterol/gamma-hch transport system permease protein | SAMN05216354_0161 | Not Available | Negative | 46851 - 47597 | 27325.2 |
| lipopolysaccharide export system atp-binding protein | SAMN05216354_0162 | Not Available | Positive | 47693 - 48508 | 30870.7 |
| trigger factor | SAMN05216354_0163 | Not Available | Positive | 48601 - 49962 | 51641.7 |
| atp-dependent clp protease, protease subunit | SAMN05216354_0164 | Not Available | Positive | 50040 - 50768 | 27302.8 |
| atp-dependent clp protease atp-binding subunit clpx | SAMN05216354_0165 | Not Available | Positive | 50779 - 52005 | 46218.9 |
Pathways
401 pathways
Health Effects
No health effects information available for this bacterium.
