Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
847936 bp
Thymine Count
865299 bp
Guanine Count
773817 bp
Cytosine Count
759650 bp
Genome Length
3248162 bp
Protein-coding Genes
2714 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-gln | Not Available | Not Available | Positive | 672445 - 672515 | Not Available |
| 4-deoxy-l-threo-5-hexosulose-uronate ketol-isomerase | SAMN05216354_0715 | Not Available | Positive | 672540 - 673382 | 31960.0 |
| gluconate 5-dehydrogenase | SAMN05216354_0716 | Not Available | Positive | 673404 - 674207 | 28905.8 |
| dna-binding protein hu-beta | SAMN05216354_0717 | Not Available | Negative | 674282 - 674551 | 9249.46 |
| membrane associated serine protease, rhomboid family | SAMN05216354_0718 | Not Available | Positive | 674806 - 675750 | 35836.4 |
| metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family | SAMN05216354_0719 | Not Available | Positive | 675747 - 676841 | 42114.0 |
| secd/secf fusion protein | SAMN05216354_0720 | Not Available | Positive | 676957 - 679980 | 109772.0 |
| Trna-arg | Not Available | Not Available | Positive | 680164 - 680238 | Not Available |
| hypothetical protein | SAMN05216354_0722 | Not Available | Positive | 680474 - 681151 | 25382.1 |
| beta-xylosidase | SAMN05216354_0723 | Not Available | Negative | 681179 - 683980 | 104056.0 |
Pathways
401 pathways
Health Effects
No health effects information available for this bacterium.
