Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
847936 bp
Thymine Count
865299 bp
Guanine Count
773817 bp
Cytosine Count
759650 bp
Genome Length
3248162 bp
Protein-coding Genes
2714 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted o-methyltransferase yrrm | SAMN05216354_0704 | Not Available | Positive | 664186 - 664812 | 24052.0 |
| ribosome-binding factor a | SAMN05216354_0705 | Not Available | Positive | 664817 - 665152 | 13011.8 |
| lipoprotein-releasing system permease protein | SAMN05216354_0706 | Not Available | Positive | 665164 - 666396 | 45642.8 |
| integrase/recombinase xerd | SAMN05216354_0707 | Not Available | Positive | 666396 - 667298 | 34733.0 |
| methionine adenosyltransferase | SAMN05216354_0708 | Not Available | Positive | 667399 - 668655 | 46566.3 |
| protein of unknown function | SAMN05216354_0709 | Not Available | Positive | 668659 - 669678 | 38843.6 |
| uroporphyrinogen-iii synthase | SAMN05216354_0710 | Not Available | Positive | 669686 - 670435 | 28652.8 |
| ribonuclease p protein component | SAMN05216354_0711 | Not Available | Positive | 670444 - 670830 | 14823.2 |
| hypothetical protein | SAMN05216354_0712 | Not Available | Positive | 670827 - 671057 | 8570.77 |
| tyrosyl-trna synthetase | SAMN05216354_0713 | Not Available | Positive | 671091 - 672386 | 48933.9 |
Pathways
401 pathways
Health Effects
No health effects information available for this bacterium.
