Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
847936 bp
Thymine Count
865299 bp
Guanine Count
773817 bp
Cytosine Count
759650 bp
Genome Length
3248162 bp
Protein-coding Genes
2714 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoenolpyruvate carboxykinase (atp) | SAMN05216354_0693 | Not Available | Positive | 653567 - 655180 | 59379.4 |
| hypothetical protein | SAMN05216354_0694 | Not Available | Positive | 655662 - 656798 | 42982.6 |
| outer membrane protein beta-barrel domain-containing protein | SAMN05216354_0695 | Not Available | Positive | 656800 - 657471 | 25022.7 |
| undecaprenyl diphosphate synthase | SAMN05216354_0696 | Not Available | Positive | 657477 - 658223 | 28646.2 |
| beta-barrel assembly machine subunit bama | SAMN05216354_0697 | Not Available | Positive | 658281 - 660950 | 101115.0 |
| periplasmic chaperone for outer membrane proteins skp | SAMN05216354_0698 | Not Available | Positive | 660978 - 661487 | 19173.1 |
| periplasmic chaperone for outer membrane proteins skp | SAMN05216354_0699 | Not Available | Positive | 661528 - 662031 | 18775.4 |
| periplasmic chaperone for outer membrane proteins skp | SAMN05216354_0700 | Not Available | Positive | 662033 - 662545 | 19727.9 |
| glutamate racemase | SAMN05216354_0701 | Not Available | Positive | 662532 - 663374 | 31482.1 |
| 3-dehydroquinate dehydratase | SAMN05216354_0703 | Not Available | Positive | 663692 - 664189 | 18652.5 |
Pathways
401 pathways
Health Effects
No health effects information available for this bacterium.
