Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
847936 bp
Thymine Count
865299 bp
Guanine Count
773817 bp
Cytosine Count
759650 bp
Genome Length
3248162 bp
Protein-coding Genes
2714 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-fucose isomerase | SAMN05216354_0683 | Not Available | Negative | 637547 - 639009 | 54252.4 |
| nicotinamide mononucleotide transporter | SAMN05216354_0684 | Not Available | Negative | 639116 - 639697 | 22740.2 |
| iron complex outermembrane recepter protein | SAMN05216354_0685 | Not Available | Negative | 639711 - 642197 | 94100.1 |
| phosphate:na+ symporter | SAMN05216354_0686 | Not Available | Negative | 642388 - 644184 | 67224.5 |
| uridine kinase | SAMN05216354_0687 | Not Available | Positive | 644244 - 645905 | 63119.8 |
| 2-oxoglutarate ferredoxin oxidoreductase subunit alpha | SAMN05216354_0688 | Not Available | Positive | 646398 - 648242 | 66372.7 |
| 2-oxoglutarate ferredoxin oxidoreductase subunit beta | SAMN05216354_0689 | Not Available | Positive | 648249 - 649253 | 36585.4 |
| solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5 | SAMN05216354_0690 | Not Available | Positive | 649446 - 650951 | 53988.2 |
| uridine kinase | SAMN05216354_0691 | Not Available | Negative | 650995 - 652674 | 64400.2 |
| uracil phosphoribosyltransferase | SAMN05216354_0692 | Not Available | Negative | 652678 - 653334 | 24208.5 |
Pathways
401 pathways
Health Effects
No health effects information available for this bacterium.
