Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
847936 bp
Thymine Count
865299 bp
Guanine Count
773817 bp
Cytosine Count
759650 bp
Genome Length
3248162 bp
Protein-coding Genes
2714 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-leu | Not Available | Not Available | Positive | 11766 - 11850 | Not Available |
| tricorn protease c1 domain-containing protein | SAMN05216354_0137 | Not Available | Negative | 11913 - 12917 | 38537.4 |
| protein of unknown function | SAMN05216354_0138 | Not Available | Negative | 12914 - 13651 | 28106.6 |
| topoisomerase-4 subunit a | SAMN05216354_0139 | Not Available | Negative | 13662 - 16433 | 105980.0 |
| alanyl-trna synthetase | SAMN05216354_0140 | Not Available | Positive | 16865 - 19525 | 100227.0 |
| dna-binding transcriptional regulator, merr family | SAMN05216354_0141 | Not Available | Positive | 19569 - 19919 | 13696.7 |
| c-terminal processing protease ctpa/prc, contains a pdz domain | SAMN05216354_0142 | Not Available | Negative | 19967 - 23152 | 119913.0 |
| pectinesterase | SAMN05216354_0143 | Not Available | Negative | 23183 - 24157 | 37192.4 |
| gtp pyrophosphokinase | SAMN05216354_0144 | Not Available | Negative | 24170 - 26437 | 86378.5 |
| membrane-bound lytic murein transglycosylase d | SAMN05216354_0145 | Not Available | Negative | 26480 - 27952 | 55657.1 |
Pathways
401 pathways
Health Effects
No health effects information available for this bacterium.
