Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
847936 bp
Thymine Count
865299 bp
Guanine Count
773817 bp
Cytosine Count
759650 bp
Genome Length
3248162 bp
Protein-coding Genes
2714 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5s ribosomal rna . bacterial tsu | Not Available | Not Available | Positive | 541111 - 541223 | 18.01 |
| spoiid/lytb domain protein | SAMN05216354_0578 | Not Available | Negative | 540347 - 544033 | 140861.0 |
| 23s rrna (adenine2503-c2)-methyltransferase | SAMN05216354_0579 | Not Available | Positive | 544121 - 545212 | 40857.6 |
| 4-hydroxythreonine-4-phosphate dehydrogenase | SAMN05216354_0580 | Not Available | Positive | 545233 - 546318 | 40132.0 |
| uncharacterized membrane protein ybhn, upf0104 family | SAMN05216354_0581 | Not Available | Positive | 546315 - 547319 | 37934.7 |
| regulatory protein, fis family | SAMN05216354_0582 | Not Available | Positive | 547386 - 548627 | 46591.0 |
| lipopolysaccharide-assembly | SAMN05216354_0583 | Not Available | Positive | 548665 - 549219 | 20889.8 |
| hypothetical protein | SAMN05216354_0584 | Not Available | Positive | 549226 - 549987 | 29212.0 |
| preprotein translocase subunit secg | SAMN05216354_0585 | Not Available | Positive | 549993 - 550394 | 13484.2 |
| Trna-his | Not Available | Not Available | Positive | 550742 - 550815 | Not Available |
Pathways
401 pathways
Health Effects
No health effects information available for this bacterium.
