Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
847936 bp
Thymine Count
865299 bp
Guanine Count
773817 bp
Cytosine Count
759650 bp
Genome Length
3248162 bp
Protein-coding Genes
2714 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uridine kinase | SAMN05216354_0558 | Not Available | Positive | 521694 - 522308 | 23165.2 |
| uncharacterized membrane protein hded, duf308 family | SAMN05216354_0559 | Not Available | Negative | 522313 - 523005 | 24892.0 |
| probable phosphoglycerate mutase | SAMN05216354_0560 | Not Available | Positive | 523101 - 523607 | 19052.0 |
| hypothetical protein | SAMN05216354_0561 | Not Available | Negative | 523614 - 524522 | 35645.7 |
| hypothetical protein | SAMN05216354_0562 | Not Available | Positive | 524595 - 524699 | 3535.41 |
| capsule assembly protein wzi | SAMN05216354_0563 | Not Available | Positive | 525152 - 526672 | 57040.6 |
| lipocalin-like domain-containing protein | SAMN05216354_0564 | Not Available | Positive | 526672 - 527139 | 17776.2 |
| sugar transferase involved in lps biosynthesis (colanic, teichoic acid) | SAMN05216354_0565 | Not Available | Negative | 527136 - 527762 | 24921.6 |
| glycosyl transferase family 2 | SAMN05216354_0566 | Not Available | Negative | 527819 - 528631 | 31874.8 |
| glycosyl transferase family 11 | SAMN05216354_0567 | Not Available | Negative | 528643 - 529515 | 34123.0 |
Pathways
401 pathways
Health Effects
No health effects information available for this bacterium.
