Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
847936 bp
Thymine Count
865299 bp
Guanine Count
773817 bp
Cytosine Count
759650 bp
Genome Length
3248162 bp
Protein-coding Genes
2714 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription-repair coupling factor (superfamily ii helicase) | SAMN05216354_0538 | Not Available | Positive | 495607 - 499053 | 130995.0 |
| hsp20 family protein | SAMN05216354_0539 | Not Available | Positive | 499166 - 499588 | 16091.3 |
| uroporphyrinogen decarboxylase | SAMN05216354_0540 | Not Available | Positive | 499737 - 500756 | 38071.2 |
| outer membrane receptor proteins, mostly fe transport | SAMN05216354_0541 | Not Available | Positive | 500778 - 502877 | 78309.6 |
| major facilitator superfamily protein | SAMN05216354_0542 | Not Available | Positive | 502893 - 504119 | 46205.2 |
| uroporphyrinogen-iii synthase | SAMN05216354_0543 | Not Available | Positive | 504113 - 504892 | 27967.9 |
| hypothetical protein | SAMN05216354_0544 | Not Available | Negative | 504755 - 505081 | 12047.7 |
| formate/nitrite transporter | SAMN05216354_0545 | Not Available | Positive | 505312 - 505926 | 22090.9 |
| starch-binding associating with outer membrane | SAMN05216354_0546 | Not Available | Negative | 506047 - 507612 | 59234.3 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05216354_0547 | Not Available | Negative | 507649 - 511014 | 123810.0 |
Pathways
401 pathways
Health Effects
No health effects information available for this bacterium.
