Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
847936 bp
Thymine Count
865299 bp
Guanine Count
773817 bp
Cytosine Count
759650 bp
Genome Length
3248162 bp
Protein-coding Genes
2714 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gliding motility-associated lipoprotein gldh | SAMN05216354_0518 | Not Available | Negative | 475381 - 475860 | 18379.3 |
| cell fate regulator yaat, psp1 superfamily (controls sporulation, competence, biofilm development) | SAMN05216354_0519 | Not Available | Negative | 475835 - 476998 | 43215.7 |
| dna polymerase-3 subunit delta' | SAMN05216354_0520 | Not Available | Negative | 477028 - 478140 | 43194.5 |
| 5,10-methylenetetrahydrofolate reductase (nad(p)) | SAMN05216354_0521 | Not Available | Negative | 478137 - 479090 | 36027.3 |
| bile acid:na+ symporter, bass family | SAMN05216354_0522 | Not Available | Positive | 479170 - 480129 | 35436.8 |
| alpha-l-arabinofuranosidase | SAMN05216354_0523 | Not Available | Negative | 480197 - 482209 | 76047.9 |
| hypothetical protein | SAMN05216354_0524 | Not Available | Positive | 482269 - 482373 | 4328.32 |
| signal transduction histidine kinase | SAMN05216354_0525 | Not Available | Positive | 482370 - 484205 | 69290.5 |
| mfs transporter, sp family, xylose:h+ symportor | SAMN05216354_0526 | Not Available | Positive | 484202 - 485674 | 53378.4 |
| chey chemotaxis protein or a chey-like rec (receiver) domain | SAMN05216354_0527 | Not Available | Positive | 485717 - 486073 | 13278.0 |
Pathways
401 pathways
Health Effects
No health effects information available for this bacterium.
