Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
847936 bp
Thymine Count
865299 bp
Guanine Count
773817 bp
Cytosine Count
759650 bp
Genome Length
3248162 bp
Protein-coding Genes
2714 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-glyceraldehyde 3-phosphate reductase | SAMN05216354_0508 | Not Available | Negative | 463703 - 464665 | 36654.6 |
| glycosyl-hydrolase 97 c-terminal, oligomerisation | SAMN05216354_0509 | Not Available | Positive | 464856 - 466823 | 73189.8 |
| lysophospholipase l1 | SAMN05216354_0510 | Not Available | Positive | 467407 - 468576 | 43245.1 |
| l-rhamnose mutarotase | SAMN05216354_0511 | Not Available | Positive | 468605 - 468922 | 12326.6 |
| phosphoribosylaminoimidazolecarboxamide formyltransferase / imp cyclohydrolase | SAMN05216354_0512 | Not Available | Positive | 469048 - 469641 | 21780.2 |
| rod shape-determining protein mreb | SAMN05216354_0513 | Not Available | Positive | 469657 - 470679 | 37071.8 |
| rod shape-determining protein mrec | SAMN05216354_0514 | Not Available | Positive | 470692 - 471558 | 32388.6 |
| rod shape-determining protein mred | SAMN05216354_0515 | Not Available | Positive | 471575 - 472075 | 18845.7 |
| penicillin-binding protein 2 | SAMN05216354_0516 | Not Available | Positive | 472072 - 473925 | 69509.8 |
| rod shape determining protein roda | SAMN05216354_0517 | Not Available | Positive | 473906 - 475378 | 55392.1 |
Pathways
401 pathways
Health Effects
No health effects information available for this bacterium.
