Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
847936 bp
Thymine Count
865299 bp
Guanine Count
773817 bp
Cytosine Count
759650 bp
Genome Length
3248162 bp
Protein-coding Genes
2714 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein beta-barrel family protein | SAMN05216354_0296 | Not Available | Negative | 208262 - 210547 | 85889.8 |
| transcriptional regulator, lyttr family | SAMN05216354_0297 | Not Available | Positive | 210607 - 210990 | 14170.3 |
| tonb family c-terminal domain-containing protein | SAMN05216354_0298 | Not Available | Positive | 210987 - 211475 | 18144.1 |
| dihydrofolate reductase | SAMN05216354_0299 | Not Available | Negative | 211484 - 211966 | 18203.5 |
| thymidylate synthase | SAMN05216354_0300 | Not Available | Negative | 211963 - 212757 | 30377.3 |
| 16s rrna c967 or c1407 c5-methylase, rsmb/rsmf family | SAMN05216354_0301 | Not Available | Negative | 212754 - 213968 | 45743.2 |
| hypothetical protein | SAMN05216354_0302 | Not Available | Positive | 214086 - 214766 | 25365.4 |
| phage shock protein c (pspc) family protein | SAMN05216354_0303 | Not Available | Positive | 214772 - 214969 | 7627.59 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05216354_0304 | Not Available | Positive | 214984 - 215523 | 20366.3 |
| protein of unknown function | SAMN05216354_0305 | Not Available | Positive | 215513 - 215896 | 14623.2 |
Pathways
401 pathways
Health Effects
No health effects information available for this bacterium.
