Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
847936 bp
Thymine Count
865299 bp
Guanine Count
773817 bp
Cytosine Count
759650 bp
Genome Length
3248162 bp
Protein-coding Genes
2714 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yd repeat-containing protein | SAMN05216354_0226 | Not Available | Positive | 122784 - 125153 | 88940.0 |
| uncharacterized protein | SAMN05216354_0227 | Not Available | Positive | 125214 - 126353 | 43252.7 |
| linear amide c-n hydrolases, choloylglycine hydrolase family | SAMN05216354_0228 | Not Available | Positive | 126367 - 127437 | 39212.6 |
| phenazine biosynthesis protein phzf family | SAMN05216354_0229 | Not Available | Positive | 127462 - 128343 | 32514.9 |
| uncharacterized conserved protein ybjq, upf0145 family | SAMN05216354_0230 | Not Available | Positive | 128439 - 128756 | 11198.7 |
| surface polysaccharide o-acyltransferase, integral membrane enzyme | SAMN05216354_0231 | Not Available | Positive | 128761 - 129774 | 38850.5 |
| carboxypepd_reg-like domain-containing protein | SAMN05216354_0232 | Not Available | Positive | 129904 - 132237 | 86948.0 |
| putative endopeptidase | SAMN05216354_0233 | Not Available | Positive | 132321 - 134336 | 76589.9 |
| protein of unknown function | SAMN05216354_0234 | Not Available | Positive | 134421 - 135380 | 36097.5 |
| b3/b4 domain-containing protein (dna/rna-binding domain of phe-trna-synthetase) | SAMN05216354_0235 | Not Available | Negative | 135391 - 136056 | 24582.3 |
Pathways
401 pathways
Health Effects
No health effects information available for this bacterium.
