Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
847936 bp
Thymine Count
865299 bp
Guanine Count
773817 bp
Cytosine Count
759650 bp
Genome Length
3248162 bp
Protein-coding Genes
2714 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-dehydro-3-deoxyphosphooctonate aldolase (kdo 8-p synthase) | SAMN05216354_1448 | Not Available | Positive | 1561047 - 1561811 | 27922.9 |
| arabinose-5-phosphate isomerase | SAMN05216354_1449 | Not Available | Positive | 1561816 - 1562763 | 34601.1 |
| arac-type dna-binding protein | SAMN05216354_1450 | Not Available | Positive | 1562783 - 1566565 | 142060.0 |
| cardiolipin synthase | SAMN05216354_1451 | Not Available | Positive | 1566562 - 1567800 | 47889.8 |
| fucose 4-o-acetylase | SAMN05216354_1452 | Not Available | Positive | 1567805 - 1568920 | 43629.2 |
| flp pilus assembly protein tadd, contains tpr repeats | SAMN05216354_1453 | Not Available | Negative | 1568908 - 1571082 | 85555.2 |
| nitt/taut family transport system substrate-binding protein | SAMN05216354_1454 | Not Available | Negative | 1571095 - 1572018 | 35643.1 |
| dna repair protein rada/sms | SAMN05216354_1455 | Not Available | Positive | 1572130 - 1573515 | 50758.4 |
| phosphoglycerate kinase | SAMN05216354_1456 | Not Available | Positive | 1573667 - 1574941 | 44270.4 |
| hypothetical protein | SAMN05216354_1457 | Not Available | Positive | 1575049 - 1575513 | 17304.8 |
Pathways
275 pathways
Health Effects
No health effects information available for this bacterium.
