Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
847936 bp
Thymine Count
865299 bp
Guanine Count
773817 bp
Cytosine Count
759650 bp
Genome Length
3248162 bp
Protein-coding Genes
2714 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein, upf0371 family | SAMN05216354_1418 | Not Available | Positive | 1523463 - 1524929 | 54900.1 |
| nitrate/nitrite transporter nark | SAMN05216354_1419 | Not Available | Positive | 1524938 - 1526278 | 48576.9 |
| heptose-i-phosphate ethanolaminephosphotransferase | SAMN05216354_1420 | Not Available | Positive | 1526282 - 1528015 | 67527.5 |
| endonuclease/exonuclease/phosphatase family protein | SAMN05216354_1421 | Not Available | Negative | 1528019 - 1528987 | 37290.4 |
| transporter, nhac family | SAMN05216354_1422 | Not Available | Negative | 1529025 - 1530434 | 50213.6 |
| proton-dependent oligopeptide transporter, pot family | SAMN05216354_1423 | Not Available | Negative | 1530435 - 1531970 | 55285.8 |
| outer membrane protein beta-barrel domain-containing protein | SAMN05216354_1424 | Not Available | Negative | 1531974 - 1532813 | 31238.4 |
| lysm domain-containing protein | SAMN05216354_1425 | Not Available | Negative | 1532836 - 1534194 | 51106.7 |
| gliding motility-associated c-terminal domain-containing protein | SAMN05216354_1426 | Not Available | Positive | 1534290 - 1534676 | 14342.1 |
| excinuclease abc subunit a | SAMN05216354_1427 | Not Available | Positive | 1534680 - 1537505 | 106035.0 |
Pathways
275 pathways
Health Effects
No health effects information available for this bacterium.
