Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
847936 bp
Thymine Count
865299 bp
Guanine Count
773817 bp
Cytosine Count
759650 bp
Genome Length
3248162 bp
Protein-coding Genes
2714 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphatidylserine decarboxylase | SAMN05216354_0216 | Not Available | Negative | 110168 - 110857 | 26255.2 |
| dna polymerase-3 subunit alpha | SAMN05216354_0217 | Not Available | Positive | 111001 - 114723 | 140738.0 |
| thioredoxin | SAMN05216354_0218 | Not Available | Positive | 114791 - 115105 | 11569.1 |
| hypothetical protein | SAMN05216354_0219 | Not Available | Positive | 115109 - 115429 | 12189.1 |
| trna threonylcarbamoyladenosine biosynthesis protein tsae | SAMN05216354_0220 | Not Available | Negative | 115550 - 115957 | 15496.3 |
| response regulator receiver domain-containing protein | SAMN05216354_0221 | Not Available | Negative | 115983 - 117548 | 60594.3 |
| tetratricopeptide repeat-containing protein | SAMN05216354_0222 | Not Available | Negative | 117573 - 120452 | 111423.0 |
| hypothetical protein | SAMN05216354_0223 | Not Available | Negative | 120445 - 120636 | 6622.98 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | SAMN05216354_0224 | Not Available | Negative | 120644 - 121903 | 46903.7 |
| Trna-pro | Not Available | Not Available | Positive | 122087 - 122159 | Not Available |
Pathways
401 pathways
Health Effects
No health effects information available for this bacterium.
