Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
847936 bp
Thymine Count
865299 bp
Guanine Count
773817 bp
Cytosine Count
759650 bp
Genome Length
3248162 bp
Protein-coding Genes
2714 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-xylose isomerase | SAMN05216354_1378 | Not Available | Negative | 1476468 - 1477787 | 49313.4 |
| xylulokinase | SAMN05216354_1379 | Not Available | Negative | 1477817 - 1479307 | 53432.8 |
| response regulator receiver domain-containing protein | SAMN05216354_1380 | Not Available | Positive | 1479493 - 1479858 | 14043.4 |
| sugar transferase | SAMN05216354_1381 | Not Available | Positive | 1479874 - 1481091 | 46582.5 |
| outer membrane efflux protein | SAMN05216354_1382 | Not Available | Positive | 1481130 - 1482089 | 35312.9 |
| hypothetical protein | SAMN05216354_1383 | Not Available | Positive | 1482102 - 1484279 | 83247.7 |
| o-antigen ligase | SAMN05216354_1384 | Not Available | Positive | 1484279 - 1485799 | 57388.5 |
| hypothetical protein | SAMN05216354_1385 | Not Available | Positive | 1485783 - 1486661 | 33690.7 |
| glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-n-acetylglucosamine synthase | SAMN05216354_1386 | Not Available | Positive | 1486676 - 1487848 | 44861.0 |
| glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-n-acetylglucosamine synthase | SAMN05216354_1387 | Not Available | Positive | 1487848 - 1489014 | 44727.7 |
Pathways
275 pathways
Health Effects
No health effects information available for this bacterium.
