Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
847936 bp
Thymine Count
865299 bp
Guanine Count
773817 bp
Cytosine Count
759650 bp
Genome Length
3248162 bp
Protein-coding Genes
2714 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1,4-dihydroxy-2-naphthoate prenyltransferase | SAMN05216354_1358 | Not Available | Negative | 1454674 - 1455588 | 33305.5 |
| uncharacterized protein | SAMN05216354_1359 | Not Available | Positive | 1455660 - 1456301 | 24676.8 |
| hypothetical protein | SAMN05216354_1360 | Not Available | Negative | 1456291 - 1456446 | 5680.45 |
| 23s rrna pseudouridine1911/1915/1917 synthase | SAMN05216354_1361 | Not Available | Negative | 1456446 - 1457342 | 34273.1 |
| glucuronate isomerase | SAMN05216354_1362 | Not Available | Negative | 1457474 - 1458880 | 54477.6 |
| l-asparaginase | SAMN05216354_1363 | Not Available | Positive | 1458988 - 1460019 | 38561.3 |
| outer membrane protein ompa | SAMN05216354_1364 | Not Available | Negative | 1460074 - 1461360 | 47709.0 |
| rubrerythrin | SAMN05216354_1365 | Not Available | Positive | 1461700 - 1462242 | 20614.3 |
| udp-n-acetylglucosamine 2-epimerase (non-hydrolysing) | SAMN05216354_1366 | Not Available | Negative | 1462277 - 1463341 | 38835.8 |
| riboflavin synthase alpha chain | SAMN05216354_1367 | Not Available | Positive | 1463645 - 1464244 | 22092.5 |
Pathways
275 pathways
Health Effects
No health effects information available for this bacterium.
