Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
847936 bp
Thymine Count
865299 bp
Guanine Count
773817 bp
Cytosine Count
759650 bp
Genome Length
3248162 bp
Protein-coding Genes
2714 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (uracil1939-c5)-methyltransferase | SAMN05216354_1328 | Not Available | Positive | 1423143 - 1424576 | 54548.5 |
| phosphate-selective porin o and p | SAMN05216354_1329 | Not Available | Positive | 1424670 - 1425845 | 44690.8 |
| membrane protein involved in the export of o-antigen and teichoic acid | SAMN05216354_1330 | Not Available | Negative | 1425842 - 1427389 | 56346.0 |
| glycosyl transferase family 2 | SAMN05216354_1331 | Not Available | Positive | 1427418 - 1428341 | 35479.6 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05216354_1332 | Not Available | Positive | 1428326 - 1429285 | 36979.8 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05216354_1333 | Not Available | Positive | 1429282 - 1430376 | 42657.2 |
| small subunit ribosomal protein s16 | SAMN05216354_1334 | Not Available | Negative | 1430439 - 1431005 | 20162.7 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05216354_1335 | Not Available | Positive | 1431105 - 1432055 | 36327.3 |
| hypothetical protein | SAMN05216354_1336 | Not Available | Negative | 1432539 - 1433018 | 18328.4 |
| beta-galactosidase | SAMN05216354_1337 | Not Available | Negative | 1433185 - 1436193 | 114741.0 |
Pathways
275 pathways
Health Effects
No health effects information available for this bacterium.
