Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
847936 bp
Thymine Count
865299 bp
Guanine Count
773817 bp
Cytosine Count
759650 bp
Genome Length
3248162 bp
Protein-coding Genes
2714 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05216354_1248 | Not Available | Negative | 1340309 - 1341397 | 39918.6 |
| site-specific recombinase xerd | SAMN05216354_1249 | Not Available | Negative | 1341626 - 1342555 | 35820.4 |
| protein of unknown function | SAMN05216354_1250 | Not Available | Negative | 1342621 - 1343403 | 29274.5 |
| udpglucose 6-dehydrogenase | SAMN05216354_1251 | Not Available | Negative | 1343404 - 1344723 | 48372.7 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | SAMN05216354_1252 | Not Available | Negative | 1344751 - 1345299 | 20850.7 |
| sporulation related domain-containing protein | SAMN05216354_1253 | Not Available | Positive | 1345404 - 1346450 | 39619.5 |
| fha domain-containing protein | SAMN05216354_1254 | Not Available | Positive | 1346447 - 1346980 | 19924.6 |
| formyltetrahydrofolate deformylase | SAMN05216354_1255 | Not Available | Positive | 1347101 - 1347964 | 33526.6 |
| glutamine amidotransferase | SAMN05216354_1256 | Not Available | Positive | 1347964 - 1348554 | 22145.6 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase | SAMN05216354_1257 | Not Available | Positive | 1348551 - 1349276 | 26236.4 |
Pathways
401 pathways
Health Effects
No health effects information available for this bacterium.
