Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
847936 bp
Thymine Count
865299 bp
Guanine Count
773817 bp
Cytosine Count
759650 bp
Genome Length
3248162 bp
Protein-coding Genes
2714 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| na+-transporting nadh:ubiquinone oxidoreductase subunit c | SAMN05216354_1217 | Not Available | Negative | 1299301 - 1299996 | 25123.9 |
| na+-transporting nadh:ubiquinone oxidoreductase subunit b | SAMN05216354_1218 | Not Available | Negative | 1299993 - 1301153 | 41965.8 |
| na+-transporting nadh:ubiquinone oxidoreductase subunit a | SAMN05216354_1219 | Not Available | Negative | 1301181 - 1302527 | 49032.0 |
| family of unknown function | SAMN05216354_1220 | Not Available | Positive | 1302634 - 1307064 | 163837.0 |
| hypothetical protein | SAMN05216354_1221 | Not Available | Positive | 1307126 - 1307410 | 10682.5 |
| uncharacterized membrane protein | SAMN05216354_1222 | Not Available | Negative | 1307413 - 1308330 | 34472.4 |
| trna pseudouridine38-40 synthase | SAMN05216354_1223 | Not Available | Negative | 1308334 - 1309116 | 29960.6 |
| hypothetical protein | SAMN05216354_1224 | Not Available | Negative | 1309500 - 1310699 | 45362.1 |
| hypothetical protein | SAMN05216354_1225 | Not Available | Positive | 1310958 - 1312226 | 46395.6 |
| 4fe-4s binding domain-containing protein | SAMN05216354_1226 | Not Available | Positive | 1312223 - 1313032 | 30699.0 |
Pathways
401 pathways
Health Effects
No health effects information available for this bacterium.
