Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
847936 bp
Thymine Count
865299 bp
Guanine Count
773817 bp
Cytosine Count
759650 bp
Genome Length
3248162 bp
Protein-coding Genes
2714 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (adenine1518-n6/adenine1519-n6)-dimethyltransferase | SAMN05216354_0196 | Not Available | Positive | 87568 - 88440 | 33406.8 |
| peptidyl-prolyl cis-trans isomerase b (cyclophilin b) | SAMN05216354_0197 | Not Available | Negative | 88854 - 89606 | 28455.5 |
| putative efflux protein, mate family | SAMN05216354_0198 | Not Available | Negative | 89603 - 91000 | 49912.8 |
| hypothetical protein | SAMN05216354_0199 | Not Available | Negative | 91016 - 92893 | 70972.8 |
| protein of unknown function | SAMN05216354_0200 | Not Available | Negative | 92940 - 93257 | 11710.0 |
| Trna-lys | Not Available | Not Available | Positive | 93627 - 93699 | Not Available |
| predicted purr-regulated permease perm | SAMN05216354_0202 | Not Available | Negative | 93799 - 94899 | 41227.1 |
| thymidine kinase | SAMN05216354_0203 | Not Available | Negative | 94874 - 95476 | 22367.8 |
| 16s rrna (cytidine1402-2'-o)-methyltransferase | SAMN05216354_0204 | Not Available | Positive | 95648 - 96322 | 24649.8 |
| hypothetical protein | SAMN05216354_0205 | Not Available | Positive | 96353 - 97201 | 32256.5 |
Pathways
401 pathways
Health Effects
No health effects information available for this bacterium.
