Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
847936 bp
Thymine Count
865299 bp
Guanine Count
773817 bp
Cytosine Count
759650 bp
Genome Length
3248162 bp
Protein-coding Genes
2714 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arabinan endo-1,5-alpha-l-arabinosidase | SAMN05216354_1126 | Not Available | Positive | 1202987 - 1204417 | 52315.3 |
| hypothetical protein | SAMN05216354_1127 | Not Available | Positive | 1204687 - 1204869 | 6199.68 |
| hypothetical protein | SAMN05216354_1128 | Not Available | Negative | 1204969 - 1205130 | 6123.48 |
| leucine rich repeat-containing protein | SAMN05216354_1130 | Not Available | Positive | 1205131 - 1205656 | 18933.3 |
| leucine rich repeat-containing protein | SAMN05216354_1131 | Not Available | Positive | 1205732 - 1207360 | 58365.1 |
| trna(ile)-lysidine synthase | SAMN05216354_1132 | Not Available | Negative | 1207425 - 1208741 | 49123.1 |
| 23s rrna (cytosine1962-c5)-methyltransferase | SAMN05216354_1133 | Not Available | Negative | 1208751 - 1209923 | 43862.4 |
| 3'-5' exonuclease | SAMN05216354_1134 | Not Available | Negative | 1209895 - 1210557 | 25198.2 |
| dna segregation atpase ftsk/spoiiie, s-dna-t family | SAMN05216354_1135 | Not Available | Positive | 1210593 - 1213121 | 93963.1 |
| outer membrane lipoprotein-sorting protein | SAMN05216354_1136 | Not Available | Positive | 1213175 - 1213789 | 22929.8 |
Pathways
401 pathways
Health Effects
No health effects information available for this bacterium.
