Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421847_1000 | Not Available | Negative | 1025548 - 1026954 | 51650.8 |
| lsu ribosomal protein l31p | SAMN05421847_1001 | Not Available | Positive | 1027303 - 1027554 | 9642.63 |
| hypothetical protein | SAMN05421847_1002 | Not Available | Negative | 1027691 - 1027801 | 4240.38 |
| udp-n-acetylglucosamine diphosphorylase/glucosamine-1-phosphate n-acetyltransferase | SAMN05421847_1003 | Not Available | Positive | 1027831 - 1028991 | 43232.7 |
| hypothetical protein | SAMN05421847_1004 | Not Available | Positive | 1028994 - 1029356 | 14330.5 |
| upf0176 protein | SAMN05421847_1006 | Not Available | Positive | 1030428 - 1031780 | 51395.7 |
| 5-formyltetrahydrofolate cyclo-ligase | SAMN05421847_1007 | Not Available | Positive | 1031908 - 1032510 | 23447.9 |
| hypothetical protein | SAMN05421847_1008 | Not Available | Negative | 1032447 - 1033028 | 22242.0 |
| hypothetical protein | SAMN05421847_1009 | Not Available | Negative | 1033012 - 1034151 | 44150.4 |
| hypothetical protein | SAMN05421847_1010 | Not Available | Positive | 1034342 - 1034569 | 7394.63 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
