Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421847_0990 | Not Available | Negative | 1014434 - 1014712 | 10114.3 |
| glpgli family protein | SAMN05421847_0991 | Not Available | Negative | 1014925 - 1015755 | 31985.4 |
| glpgli family protein | SAMN05421847_0992 | Not Available | Negative | 1015736 - 1016446 | 27703.9 |
| hypothetical protein | SAMN05421847_0993 | Not Available | Negative | 1016489 - 1016752 | 9205.82 |
| hypothetical protein | SAMN05421847_0994 | Not Available | Positive | 1016908 - 1017879 | 37680.8 |
| hypothetical protein | SAMN05421847_0995 | Not Available | Positive | 1017941 - 1020430 | 97131.4 |
| por secretion system c-terminal sorting domain-containing protein | SAMN05421847_0996 | Not Available | Negative | 1020504 - 1022717 | 78592.9 |
| glpgli family protein | SAMN05421847_0997 | Not Available | Negative | 1022815 - 1023636 | 32580.7 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | SAMN05421847_0998 | Not Available | Negative | 1023813 - 1025036 | 45921.4 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | SAMN05421847_0999 | Not Available | Negative | 1025160 - 1025486 | 12600.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
