Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| large subunit ribosomal protein l16 | SAMN05421847_0980 | Not Available | Negative | 1008274 - 1008699 | 15888.8 |
| small subunit ribosomal protein s3 | SAMN05421847_0981 | Not Available | Negative | 1008829 - 1009560 | 27314.2 |
| lsu ribosomal protein l22p | SAMN05421847_0982 | Not Available | Negative | 1009568 - 1009972 | 14986.4 |
| ssu ribosomal protein s19p | SAMN05421847_0983 | Not Available | Negative | 1009972 - 1010250 | 10254.4 |
| large subunit ribosomal protein l2 | SAMN05421847_0984 | Not Available | Negative | 1010253 - 1011074 | 29896.3 |
| lsu ribosomal protein l23p | SAMN05421847_0985 | Not Available | Negative | 1011090 - 1011380 | 10465.0 |
| large subunit ribosomal protein l4 | SAMN05421847_0986 | Not Available | Negative | 1011384 - 1012013 | 23667.8 |
| lsu ribosomal protein l3p | SAMN05421847_0987 | Not Available | Negative | 1012004 - 1012630 | 22395.2 |
| glpgli family protein | SAMN05421847_0988 | Not Available | Negative | 1012877 - 1013662 | 30674.4 |
| glpgli family protein | SAMN05421847_0989 | Not Available | Negative | 1013650 - 1014351 | 27983.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
