Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ssu ribosomal protein s5p | SAMN05421847_0970 | Not Available | Negative | 1004362 - 1004883 | 18066.1 |
| large subunit ribosomal protein l18 | SAMN05421847_0971 | Not Available | Negative | 1004896 - 1005249 | 12703.5 |
| lsu ribosomal protein l6p | SAMN05421847_0972 | Not Available | Negative | 1005261 - 1005806 | 19630.1 |
| ssu ribosomal protein s8p | SAMN05421847_0973 | Not Available | Negative | 1005824 - 1006222 | 14660.9 |
| ssu ribosomal protein s14p | SAMN05421847_0974 | Not Available | Negative | 1006254 - 1006523 | 10165.5 |
| large subunit ribosomal protein l5 | SAMN05421847_0975 | Not Available | Negative | 1006527 - 1007078 | 20449.1 |
| lsu ribosomal protein l24p | SAMN05421847_0976 | Not Available | Negative | 1007090 - 1007419 | 11873.7 |
| lsu ribosomal protein l14p | SAMN05421847_0977 | Not Available | Negative | 1007437 - 1007805 | 13424.5 |
| ssu ribosomal protein s17p | SAMN05421847_0978 | Not Available | Negative | 1007805 - 1008059 | 9878.0 |
| large subunit ribosomal protein l29 | SAMN05421847_0979 | Not Available | Negative | 1008074 - 1008262 | 7143.69 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
