Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enolase | SAMN05421847_0950 | Not Available | Negative | 985128 - 986420 | 46508.2 |
| glpgli family protein | SAMN05421847_0951 | Not Available | Negative | 986561 - 987391 | 32310.0 |
| hypothetical protein | SAMN05421847_0952 | Not Available | Positive | 987470 - 987829 | 13176.7 |
| cubico group peptidase, beta-lactamase class c family | SAMN05421847_0953 | Not Available | Negative | 987849 - 988850 | 38513.2 |
| his kinase a (phospho-acceptor) domain-containing protein | SAMN05421847_0954 | Not Available | Positive | 989156 - 991207 | 77996.1 |
| two component regulator propeller | SAMN05421847_0955 | Not Available | Positive | 991254 - 994907 | 136036.0 |
| response regulator receiver domain-containing protein | SAMN05421847_0956 | Not Available | Positive | 995004 - 995381 | 14498.9 |
| adenylate cyclase, class 3 | SAMN05421847_0957 | Not Available | Positive | 995378 - 996409 | 38404.5 |
| uncharacterized membrane-anchored protein yitt, contains duf161 and duf2179 domains | SAMN05421847_0958 | Not Available | Positive | 996422 - 997876 | 54452.4 |
| ribosomal protein s18 acetylase rimi | SAMN05421847_0959 | Not Available | Negative | 997928 - 998449 | 20370.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
