Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421847_0919 | Not Available | Negative | 948386 - 948511 | 4779.15 |
| protein of unknown function | SAMN05421847_0920 | Not Available | Positive | 948846 - 949952 | 43522.3 |
| succinyl-coa synthetase beta subunit | SAMN05421847_0921 | Not Available | Positive | 950813 - 952006 | 42451.8 |
| hypothetical protein | SAMN05421847_0922 | Not Available | Positive | 952103 - 952393 | 11171.3 |
| conserved hypothetical protein | SAMN05421847_0923 | Not Available | Negative | 952382 - 953353 | 37510.4 |
| udp-2,3-diacylglucosamine pyrophosphatase lpxh | SAMN05421847_0924 | Not Available | Negative | 953438 - 954262 | 31809.2 |
| dna-binding regulatory protein, yebc/pmpr family | SAMN05421847_0925 | Not Available | Negative | 954324 - 955064 | 27776.6 |
| thrombospondin type 3 repeat-containing protein | SAMN05421847_0926 | Not Available | Negative | 955164 - 956657 | 53146.0 |
| ssra-binding protein | SAMN05421847_0927 | Not Available | Negative | 956735 - 957193 | 17721.9 |
| atpase components of abc transporters with duplicated atpase domains | SAMN05421847_0928 | Not Available | Positive | 957283 - 958905 | 61545.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
