Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421847_0079 | Not Available | Negative | 71552 - 71800 | 9610.99 |
| putative atpase | SAMN05421847_0080 | Not Available | Positive | 71896 - 73176 | 47661.2 |
| prephenate dehydratase | SAMN05421847_0081 | Not Available | Negative | 73232 - 74068 | 31212.7 |
| protein of unknown function | SAMN05421847_0082 | Not Available | Negative | 74129 - 74731 | 22391.3 |
| ca-activated chloride channel family protein | SAMN05421847_0083 | Not Available | Negative | 74833 - 75831 | 37373.8 |
| hypothetical protein | SAMN05421847_0084 | Not Available | Negative | 75824 - 76720 | 34455.8 |
| protein of unknown function duf58 | SAMN05421847_0085 | Not Available | Negative | 76726 - 77589 | 33390.2 |
| moxr-like atpase | SAMN05421847_0087 | Not Available | Negative | 77842 - 78846 | 37568.9 |
| dinb superfamily protein | SAMN05421847_0088 | Not Available | Positive | 79075 - 79545 | 18398.8 |
| 23s rrna (guanosine2251-2'-o)-methyltransferase | SAMN05421847_0089 | Not Available | Positive | 79573 - 80319 | 27477.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
