Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421847_0898 | Not Available | Positive | 924510 - 925481 | 38304.1 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05421847_0899 | Not Available | Positive | 925485 - 926417 | 36725.3 |
| glycosyl transferases group 1 | SAMN05421847_0900 | Not Available | Positive | 926427 - 927719 | 49647.8 |
| mannose-6-phosphate isomerase, type 2 | SAMN05421847_0901 | Not Available | Negative | 927736 - 928080 | 13413.0 |
| glutamyl-trna synthetase | SAMN05421847_0902 | Not Available | Positive | 928166 - 929677 | 57608.6 |
| acetyl-coa carboxylase carboxyl transferase subunit alpha | SAMN05421847_0903 | Not Available | Positive | 929730 - 930686 | 35768.1 |
| hypothetical protein | SAMN05421847_0904 | Not Available | Negative | 930769 - 931341 | 21470.0 |
| elongation factor ts | SAMN05421847_0905 | Not Available | Positive | 931476 - 932300 | 29544.3 |
| gliding motility-associated c-terminal domain-containing protein | SAMN05421847_0906 | Not Available | Positive | 932426 - 935461 | 110385.0 |
| gliding motility-associated c-terminal domain-containing protein | SAMN05421847_0907 | Not Available | Positive | 935518 - 939654 | 149471.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
