Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05421847_0867 | Not Available | Negative | 894960 - 895430 | 17675.2 |
| sh3 domain-containing protein | SAMN05421847_0868 | Not Available | Negative | 895432 - 896148 | 27013.1 |
| predicted o-methyltransferase yrrm | SAMN05421847_0869 | Not Available | Negative | 896231 - 896941 | 27241.8 |
| hypothetical protein | SAMN05421847_0870 | Not Available | Positive | 896954 - 897193 | 9333.17 |
| chemotaxis protein motb | SAMN05421847_0871 | Not Available | Negative | 897549 - 898382 | 29953.1 |
| trna(ile)-lysidine synthase | SAMN05421847_0872 | Not Available | Positive | 898509 - 899789 | 49556.0 |
| thiol:disulfide interchange protein dsbd | SAMN05421847_0873 | Not Available | Positive | 899880 - 901949 | 76396.4 |
| carboxypepd_reg-like domain-containing protein | SAMN05421847_0874 | Not Available | Negative | 902025 - 904670 | 101303.0 |
| glpgli family protein | SAMN05421847_0875 | Not Available | Negative | 904681 - 905460 | 30232.0 |
| hypothetical protein | SAMN05421847_0876 | Not Available | Negative | 905486 - 905764 | 9563.43 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
