Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421847_0846 | Not Available | Negative | 873616 - 873942 | 12140.2 |
| peptidase family m48 | SAMN05421847_0847 | Not Available | Negative | 874025 - 874831 | 29012.0 |
| protein of unknown function | SAMN05421847_0848 | Not Available | Positive | 875021 - 875551 | 19822.4 |
| methylmalonyl-coa mutase metallochaperone meab | SAMN05421847_0849 | Not Available | Negative | 875552 - 876535 | 36574.4 |
| heterodimeric methylmalonyl-coa mutase large subunit precursor | SAMN05421847_0850 | Not Available | Negative | 876541 - 878658 | 78086.8 |
| hypothetical protein | SAMN05421847_0851 | Not Available | Negative | 879098 - 879577 | 16853.3 |
| peptide chain release factor 1 | SAMN05421847_0852 | Not Available | Negative | 879698 - 880783 | 40461.1 |
| tetratricopeptide repeat-containing protein | SAMN05421847_0853 | Not Available | Negative | 880906 - 882657 | 65012.9 |
| phosphate transport system substrate-binding protein | SAMN05421847_0854 | Not Available | Negative | 882727 - 883596 | 32862.7 |
| hypothetical protein | SAMN05421847_0855 | Not Available | Negative | 883586 - 883780 | 7390.46 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
