Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted purr-regulated permease perm | SAMN05421847_0836 | Not Available | Positive | 863746 - 864861 | 42096.1 |
| protein of unknown function | SAMN05421847_0837 | Not Available | Positive | 865132 - 866049 | 35142.3 |
| hypothetical protein | SAMN05421847_0838 | Not Available | Positive | 866077 - 866508 | 16366.5 |
| glucose-6-phosphate isomerase | SAMN05421847_0839 | Not Available | Positive | 866634 - 868274 | 62124.6 |
| methylenetetrahydrofolate dehydrogenase (nadp+) / methenyltetrahydrofolate cyclohydrolase | SAMN05421847_0840 | Not Available | Positive | 868281 - 869165 | 32365.6 |
| organic radical activating enzyme | SAMN05421847_0841 | Not Available | Positive | 869340 - 869969 | 23786.8 |
| putative colanic acid biosysnthesis udp-glucose lipid carrier transferase | SAMN05421847_0842 | Not Available | Positive | 869997 - 871364 | 53375.8 |
| phospholipid/cholesterol/gamma-hch transport system permease protein | SAMN05421847_0843 | Not Available | Positive | 871404 - 872156 | 27251.1 |
| phospholipid/cholesterol/gamma-hch transport system atp-binding protein | SAMN05421847_0844 | Not Available | Positive | 872156 - 872974 | 30882.2 |
| outer membrane protein beta-barrel domain-containing protein | SAMN05421847_0845 | Not Available | Positive | 872958 - 873581 | 22969.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
