Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421847_0826 | Not Available | Negative | 849805 - 849978 | 6451.97 |
| cysteine-rich domain-containing protein | SAMN05421847_0827 | Not Available | Negative | 849978 - 850763 | 29226.5 |
| acetyltransferase (gnat) family protein | SAMN05421847_0828 | Not Available | Negative | 850795 - 851238 | 17068.5 |
| 4fe-4s dicluster domain-containing protein | SAMN05421847_0829 | Not Available | Negative | 851291 - 852619 | 50365.8 |
| phospholipid/cholesterol/gamma-hch transport system substrate-binding protein | SAMN05421847_0830 | Not Available | Negative | 852633 - 853583 | 34655.9 |
| peptidyl-prolyl cis-trans isomerase d | SAMN05421847_0831 | Not Available | Negative | 853703 - 855856 | 79483.8 |
| atp-dependent lon protease | SAMN05421847_0832 | Not Available | Positive | 856208 - 858607 | 89544.3 |
| aspartate kinase | SAMN05421847_0833 | Not Available | Positive | 858887 - 861337 | 90302.0 |
| homoserine kinase | SAMN05421847_0834 | Not Available | Positive | 861402 - 862334 | 32783.6 |
| threonine synthase | SAMN05421847_0835 | Not Available | Positive | 862370 - 863662 | 48125.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
