Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421847_0816 | Not Available | Positive | 840168 - 840905 | 26602.0 |
| hypothetical protein | SAMN05421847_0817 | Not Available | Positive | 840980 - 841732 | 28664.6 |
| hypothetical protein | SAMN05421847_0818 | Not Available | Positive | 841735 - 842514 | 29849.4 |
| seryl-trna synthetase | SAMN05421847_0819 | Not Available | Negative | 842520 - 843788 | 47777.4 |
| hypothetical protein | SAMN05421847_0820 | Not Available | Negative | 843842 - 844348 | 18726.3 |
| membrane protein involved in the export of o-antigen and teichoic acid | SAMN05421847_0821 | Not Available | Negative | 844442 - 845689 | 47073.8 |
| asparagine synthase (glutamine-hydrolysing) | SAMN05421847_0822 | Not Available | Negative | 845692 - 847329 | 63480.2 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05421847_0823 | Not Available | Negative | 847329 - 848453 | 42984.3 |
| methyltransferase domain-containing protein | SAMN05421847_0824 | Not Available | Positive | 848510 - 849319 | 31319.7 |
| hypothetical protein | SAMN05421847_0825 | Not Available | Negative | 849324 - 849815 | 18717.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
