Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoprotein-releasing system permease protein | SAMN05421847_0069 | Not Available | Negative | 63786 - 64991 | 44548.8 |
| ribosome-binding factor a | SAMN05421847_0070 | Not Available | Negative | 64998 - 65357 | 13582.4 |
| methylmalonyl-coa epimerase | SAMN05421847_0071 | Not Available | Positive | 65510 - 65908 | 14963.9 |
| Trna-met | Not Available | Not Available | Positive | 65985 - 66058 | Not Available |
| hypothetical protein | SAMN05421847_0073 | Not Available | Positive | 66399 - 66800 | 15567.3 |
| d-3-phosphoglycerate dehydrogenase | SAMN05421847_0074 | Not Available | Positive | 66842 - 67807 | 34767.1 |
| large conductance mechanosensitive channel | SAMN05421847_0075 | Not Available | Negative | 67885 - 68256 | 13204.7 |
| hypothetical protein | SAMN05421847_0076 | Not Available | Negative | 68331 - 68927 | 23030.9 |
| nad(p)h-hydrate epimerase | SAMN05421847_0077 | Not Available | Positive | 69102 - 70661 | 57584.5 |
| prolipoprotein diacylglyceryl transferase | SAMN05421847_0078 | Not Available | Negative | 70675 - 71544 | 33252.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
